Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920264.1_cds_XP_016469424.1_61968
CDS Infomation

[gene=LOC107791802] [db_xref=GeneID:107791802] [protein=plant UBX domain-containing protein 2-like] [protein_id=XP_016469424.1] [location=join(29722..30567,35711..35989,37097..37351)] [gbkey=CDS]
Sequence

ATGGGTGACATGAAGGATAAAGTCAAAGGGTTCATGAAAAAAGTCGCATCTTCTTCTTCA
GGTAAGTTTAAAGGCCAAGGTAGAGTTTTGGGTGGTTCATCTTCTTCAGGACCCTCAAAT
CATGTCAATAATTTTTCATCACATCCCCTAAATACAAGGCAGAATCAACAACTTTCATGC
ACAAAAATATCGCCTCAAAAATCAAGTAATTCTGATCAAAGAATTGTGAATAAATGTGAA
ATTCAGGTCAACAAAAGTGAATCAAAGGACGGTTTTGATCCATATGGTGAATTGATCACT
TCTGGGAAGAAAAACCCGGAAGGGTATTCACTTACTAATGTGTTTGAATGCCCTGTCTGT
GGTAGTGGTTTTGTTTCTGAAGAAGAGGTGTCAACTCATATTGATAGCTGTTTAAGTTCT
GAAGTGTCTTCTAATTTGGGAGTTGAAAGTAAAGCTGAAGTTAAAAGTGAATTGGAAACA
TGTGTTAGTGCATATGTTTCAGGGAAGCCCTCAGAAGGGTCAGTTGAAGTGGTCATTAAG
TTGTTAAAGAATATTGTGAAGGAACCAGAGAATGCCAAGTTTAGGAAAATAAGGATGGGG
AATCCAAAAATAAAAGAGGCTATAGGTGATGTTGTAGGAGGAGTGGAGCTATTGGAATTT
GTTGGATTTGAGTTGAAAGAAGACGGTGGGGAGATTTGGGCTGTGATGGATGTTCCTTCT
GAAGAACAACTTGTTATGCTTAAGAATGTAGTTTCACTCTTGGAACCGAAGAAGGTTGAA
GAGTTGGTGTCGGTATCCCAAGTTAAGGCGAGTGAACCAGTTGAGCCGAAGAAGATTGAT
AGACAGATTCGGGTATTCTTTTCTGTTCCCGAGAGTGTAGCAGCAAAAATTGAGCTACCT
GATTCTTTCTTTAACCTCTCACGTGAGGAATTGAGAAGAGAAGCAGAGATGAGGAAGAAG
AAATTAGAAGATTCCAAATTATTGATTCCTAAATCTTATCGGGAAAAGCAGGCAAAAGCT
GCAAGAAAGAAGTACACAAAATCCATTATCCGAATACAGTTTCCAGATGGAGTATTGCTT
CAAGGTGTCTTTCTACCTTCGGAGCCAACTAGTGCTCTTTATGAGTTTGTGAGCTCAGCG
TTAAAGGAACCAAGCTTAGAGTTCGAATTGTTACATCCGGTGCTTGTTAAAAAGCGGGTG
ATTCCCCATTTTCCAGCTGCTGGGGAGAGGGCCGTAACACTTGAAGAGGAGGTTTTGGTT
CCTGCAGCTCTACTCAAATTTAAACCTATCGAAACAGATTCTGTTGTTTTTACTGGTCTT
TGTAATGAGCTTCTTGAAATCAGCGAGCCCCTCGAGACTGGATCAGTTGCTTCCTCGTAA

Peptide Sequence

PEP ID

XP_016469424.1
PEP Infomation

PREDICTED: plant UBX domain-containing protein 2-like [Nicotiana tabacum]
Sequence

MGDMKDKVKGFMKKVASSSSGKFKGQGRVLGGSSSSGPSNHVNNFSSHPLNTRQNQQLSC
TKISPQKSSNSDQRIVNKCEIQVNKSESKDGFDPYGELITSGKKNPEGYSLTNVFECPVC
GSGFVSEEEVSTHIDSCLSSEVSSNLGVESKAEVKSELETCVSAYVSGKPSEGSVEVVIK
LLKNIVKEPENAKFRKIRMGNPKIKEAIGDVVGGVELLEFVGFELKEDGGEIWAVMDVPS
EEQLVMLKNVVSLLEPKKVEELVSVSQVKASEPVEPKKIDRQIRVFFSVPESVAAKIELP
DSFFNLSREELRREAEMRKKKLEDSKLLIPKSYREKQAKAARKKYTKSIIRIQFPDGVLL
QGVFLPSEPTSALYEFVSSALKEPSLEFELLHPVLVKKRVIPHFPAAGERAVTLEEEVLV
PAALLKFKPIETDSVVFTGLCNELLEISEPLETGSVASS

Transcript Sequence

Gene sequence data has not been registered.